Python Programming with Application to Bioinformatics, 2 hp, VT17
| Kursnummer | 50,82 |
| År | 2017 |
| Typ | Methodcourse |
| Spår | - |
| Max antal deltagare | 30 |
| Sista ansökningsdag | 2017-09-01 |
| Språk | En |
| Kursansvarig | Frédéric Haziza and Thomas Källman |
| Institution | SciLifeLab |
| Besöksadress | Uppsala biomedicinska centrum BMC Husarg. 3 751 23 Uppsala |
| Postadress | Administrativt centrum för SciLifeLab i Uppsala Box 3037 750 03 Uppsala |
| Datum | 2017-10-09 to 2017-10-13 |
| Lokal | E10:1308/1309 (Trippelrummet, Navet) |
| Kurslängd | 5 days |
| Kursrapport | |
| Kursplan |
Beskrivning
National course open for PhD students (prioritized), postdocs, researchers and other employees in need of bioinformatic skills within all Swedish universities.
Inlärningsmål
After the end of the course you should be able to:
Edit and run Python code
Write file-processing python programs that produce output to the terminal and/or external files.
Create stand-alone python programs to process biological data
Know how to develop your skills in Python after the course (including debugging)
Innehåll
During this course you will learn about:
Core concepts about Python syntax: Data types, blocks and indentation, variable scoping, iteration, functions, methods and arguments
Different ways to control program flow using loops and conditional tests
Regular expressions and pattern matching
Writing functions and best-practice ways of making them usable
Reading from and writing to files
Code packaging and Python libraries
How to work with biological data using external libraries.
Undervisning
Applicants are only accepted via the course webpage:
https://www.scilifelab.se/events/python-ht17/
See webpage for more details
Examination
Participation during all presentations, demonstrations and practical exercises.
Litteratur
Not mandatory but helpful is a companion book such as “Programming Python”, or “Learning Python”. But all material will be presented in class.
Lärare
Frédéric Haziza and Thomas Källman