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Introduction to Bioinformatics using NGS data, 2 hp (location: Göteborg)
Kursnummer | 50,6 |
År | 2017 |
Typ | Methodcourse |
Spår | - |
Max antal deltagare | 30 |
Sista ansökningsdag | 2016-04-05 |
Språk | En |
Kursansvarig | Manfred Grabherr |
Institution | SciLifeLab, and Bioinformatics Core Facility at the University of Gothenburg. |
Besöksadress | Medicinaregatan 3, Göteborg |
Postadress | |
Datum | 2017-05-15 to 2017-05-19 |
Lokal | Medicinaregatan 3, Göteborg |
Kurslängd | 5 days |
Kursrapport |   |
Kursplan |   |
Beskrivning
The course will provide an entry-level introduction to a wide range of analytical techniques for massively parallel sequencing, including basic Linux commands. We will pair lectures on the theory of analysis algorithms with practical computational exercises demonstrating the use of common tools for analyzing data from each of several common sequencing study designs.
Inlärningsmål
Learn analytical techniques for massively parallel sequencing, and how to apply them to your own research project.
Innehåll
Topics covered will include:
Basic Linux usage
NGS read-to-reference alignment (genomic and RNA-Seq)
Variant calling in populations
De novo assembly of RNA-sequence data
Reference-guided RNA-Seq expression analysis
Data management
Undervisning
Applicants are only accepted via the course webpage:
https://www.scilifelab.se/events/ngsdatagbgvt17/
Course location: Göteborg
Course fee: 1800 SEK.
Examination
Participation on all lectures, exercises and discussions.
Litteratur
Will be provided during the course
Lärare
Manfred Grabherr, Magnus Alm Rosenblad
Kontakt
https://www.scilifelab.se/events/ngsdatagbgvt17/
education@scilifelab.uu.se